DiagnosticTables

Estimated parameters (excluding deviation parameters)
Any parameter with a gradient value with an absolute value above 0.001 or a parameter on bounds is colored in red.
file:
parameterchecks.html

Parameter Value Phase Min Max Init Status Parm_StDev Gradient Pr_type Prior Pr_SD Pr_Like Afterbound
L_at_Amin_Fem_GP_1 15.3494000 2 10.000 25.00 15.3494000 OK 0.5857930 5.54032e-06 No_prior NA NA NA OK
L_at_Amax_Fem_GP_1 46.8294000 2 35.000 54.00 46.8294000 OK 0.3275740 1.77141e-05 No_prior NA NA NA OK
VonBert_K_Fem_GP_1 0.1941870 2 0.030 0.35 0.1941870 OK 0.0097860 1.44699e-05 No_prior NA NA NA OK
CV_young_Fem_GP_1 0.1967090 2 0.010 1.00 0.1967090 OK 0.0111407 1.2659e-05 No_prior NA NA NA OK
CV_old_Fem_GP_1 0.0590022 2 0.010 1.00 0.0590022 OK 0.0040001 1.08739e-05 No_prior NA NA NA OK
L_at_Amin_Mal_GP_1 15.7218000 2 10.000 25.00 15.7218000 OK 0.6390970 7.64654e-06 No_prior NA NA NA OK
L_at_Amax_Mal_GP_1 45.4147000 2 35.000 54.00 45.4147000 OK 0.3310500 6.71907e-06 No_prior NA NA NA OK
VonBert_K_Mal_GP_1 0.2176110 2 0.030 0.35 0.2176110 OK 0.0115349 7.29478e-06 No_prior NA NA NA OK
CV_young_Mal_GP_1 0.2034450 2 0.010 1.00 0.2034450 OK 0.0122953 1.01382e-05 No_prior NA NA NA OK
CV_old_Mal_GP_1 0.0595739 2 0.010 1.00 0.0595739 OK 0.0038079 3.46978e-06 No_prior NA NA NA OK
SR_LN(R0) 5.4855300 1 2.000 20.00 5.4855300 OK 0.0954966 0.000185125 No_prior NA NA NA OK
Q_extraSD_Rec_Private(4) 0.1932440 4 0.001 0.50 0.1932440 OK 0.0562890 2.08792e-07 No_prior NA NA NA OK
Q_extraSD_CCFRP(5) 0.0422075 4 0.001 0.50 0.0422076 OK 0.0922253 -2.57978e-06 No_prior NA NA NA OK
Q_extraSD_NWFSC_HKL(7) 0.0350807 4 0.001 0.50 0.0350807 OK 0.0857681 -1.23664e-06 No_prior NA NA NA OK
Q_extraSD_CRFS_CPFV(8) 0.0827843 4 0.001 0.50 0.0827843 OK 0.0403560 -5.00131e-08 No_prior NA NA NA OK
Size_inflection_Commercial_dead(1) 30.7562000 4 20.000 53.00 30.7562000 OK 1.0971800 -2.02107e-07 No_prior NA NA NA OK
Size_95%width_Commercial_dead(1) 7.3114800 4 0.001 50.00 7.3114800 OK 1.4102400 5.34777e-07 No_prior NA NA NA OK
Size_DblN_peak_Commercial_live(2) 34.2106000 2 15.000 53.00 34.2106000 OK 0.5986630 1.76992e-05 No_prior NA NA NA OK
Size_DblN_ascend_se_Commercial_live(2) 3.0382600 3 -10.000 10.00 3.0382600 OK 0.2109360 -1.92092e-05 No_prior NA NA NA OK
Size_DblN_descend_se_Commercial_live(2) 3.4682100 4 -10.000 10.00 3.4682100 OK 0.2589980 8.39057e-06 No_prior NA NA NA OK
Size_DblN_peak_Rec_CPFV(3) 30.2807000 1 15.000 53.00 30.2807000 OK 0.8746730 4.37942e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_Rec_CPFV(3) 3.9879600 3 -10.000 10.00 3.9879600 OK 0.1829980 -4.88762e-06 No_prior NA NA NA OK
Size_DblN_descend_se_Rec_CPFV(3) 4.7245100 3 -10.000 10.00 4.7245100 OK 0.3522940 3.16796e-06 No_prior NA NA NA OK
Size_DblN_end_logit_Rec_CPFV(3) -1.2995700 2 -10.000 10.00 -1.2995700 OK 0.4022230 4.79455e-06 No_prior NA NA NA OK
Size_DblN_peak_Rec_Private(4) 30.6961000 2 15.000 53.00 30.6961000 OK 0.5888230 1.70589e-05 No_prior NA NA NA OK
Size_DblN_ascend_se_Rec_Private(4) 3.6201000 3 -10.000 10.00 3.6201000 OK 0.1546600 -1.66552e-05 No_prior NA NA NA OK
Size_DblN_descend_se_Rec_Private(4) 4.3112500 4 -10.000 10.00 4.3112500 OK 0.2677340 1.54776e-05 No_prior NA NA NA OK
Size_DblN_end_logit_Rec_Private(4) -1.4935300 4 -10.000 10.00 -1.4935300 OK 0.3476360 1.44798e-05 No_prior NA NA NA OK
Size_DblN_peak_CCFRP(5) 35.9532000 3 15.000 53.00 35.9532000 OK 1.1513500 -3.54172e-06 Normal 39.5 3 0.698883 OK
Size_DblN_ascend_se_CCFRP(5) 4.4558600 3 -10.000 10.00 4.4558600 OK 0.2981100 -3.08796e-06 No_prior NA NA NA OK
Size_DblN_descend_se_CCFRP(5) 3.2581900 4 -10.000 10.00 3.2581900 OK 0.4356490 -9.9874e-07 No_prior NA NA NA OK
Size_inflection_NWFSC_HKL(7) 33.4445000 4 20.000 53.00 33.4445000 OK 0.9196480 5.21347e-07 No_prior NA NA NA OK
Size_95%width_NWFSC_HKL(7) 9.4921600 4 0.001 50.00 9.4921600 OK 0.8625120 9.65424e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_WCGBT_Growth(9) 4.9037200 3 -10.000 10.00 4.9037200 OK 0.3711790 1.41902e-06 No_prior NA NA NA OK
Size_DblN_peak_COOP_Growth(10) 29.1774000 2 10.000 53.00 29.1774000 OK 11.5663000 3.0307e-05 No_prior NA NA NA OK
Size_DblN_ascend_se_COOP_Growth(10) -1.2053000 3 -10.000 10.00 -1.2053400 OK 34.4220000 -3.87293e-06 No_prior NA NA NA OK
Size_DblN_peak_Rec_CPFV(3)_BLK5repl_2000 33.7801000 3 15.000 55.00 33.7800000 OK 2.0275100 1.07892e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_Rec_CPFV(3)_BLK5repl_2000 4.2415100 4 -10.000 10.00 4.2415100 OK 0.4098890 1.65109e-06 No_prior NA NA NA OK
Size_DblN_descend_se_Rec_CPFV(3)_BLK5repl_2000 3.9891400 5 -10.000 10.00 3.9891400 OK 0.6283020 -3.27054e-06 No_prior NA NA NA OK
Size_DblN_peak_Rec_Private(4)_BLK5repl_2000 31.5920000 3 15.000 55.00 31.5920000 OK 1.6253800 -3.35377e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_Rec_Private(4)_BLK5repl_2000 3.1736600 6 -10.000 10.00 3.1736600 OK 0.7082630 -4.11592e-06 No_prior NA NA NA OK

Highly correlated parameter pairs
Pairs of parameters with the 50 highest correlations, sorted by absolute value of the correlation. Correlations above 0.95 (in absolute value) are colored in red. These parameters may be confounded or may cause convergence issues.
file: correlationcheck.html

label.i label.j corr
Size_DblN_ascend_se_COOP_Growth(10) Size_DblN_peak_COOP_Growth(10) 0.999329
Size_DblN_ascend_se_Rec_CPFV(3) Size_DblN_peak_Rec_CPFV(3) 0.923846
Size_DblN_ascend_se_Rec_Private(4) Size_DblN_peak_Rec_Private(4) 0.874933
Size_DblN_ascend_se_Commercial_live(2) Size_DblN_peak_Commercial_live(2) 0.872494
Size_DblN_ascend_se_Rec_CPFV(3)_BLK5repl_2000 Size_DblN_peak_Rec_CPFV(3)_BLK5repl_2000 0.856839
Size_DblN_descend_se_Rec_CPFV(3)_BLK5repl_2000 Size_DblN_peak_Rec_CPFV(3)_BLK5repl_2000 -0.839516
Size_DblN_ascend_se_Rec_Private(4)_BLK5repl_2000 Size_DblN_peak_Rec_Private(4)_BLK5repl_2000 0.810815
Size_DblN_descend_se_CCFRP(5) Size_DblN_peak_CCFRP(5) -0.779659
Size_DblN_descend_se_Commercial_live(2) Size_DblN_peak_Commercial_live(2) -0.750267
VonBert_K_Mal_GP_1 L_at_Amax_Mal_GP_1 -0.737952
VonBert_K_Fem_GP_1 L_at_Amax_Fem_GP_1 -0.734141
VonBert_K_Fem_GP_1 L_at_Amin_Fem_GP_1 -0.730098
VonBert_K_Mal_GP_1 L_at_Amin_Mal_GP_1 -0.690008
Size_95%width_Commercial_dead(1) Size_inflection_Commercial_dead(1) 0.681029
Size_DblN_ascend_se_CCFRP(5) Size_DblN_peak_CCFRP(5) 0.660643
Size_DblN_descend_se_Rec_CPFV(3)_BLK5repl_2000 Size_DblN_ascend_se_Rec_CPFV(3)_BLK5repl_2000 -0.659776
Size_95%width_NWFSC_HKL(7) Size_inflection_NWFSC_HKL(7) 0.648944
Size_DblN_descend_se_Rec_CPFV(3) Size_DblN_peak_Rec_CPFV(3) -0.648789
Size_DblN_end_logit_Rec_CPFV(3) Size_DblN_descend_se_Rec_CPFV(3) -0.642124
Size_DblN_descend_se_Commercial_live(2) Size_DblN_ascend_se_Commercial_live(2) -0.616044
Size_DblN_end_logit_Rec_Private(4) Size_DblN_descend_se_Rec_Private(4) -0.586269
Size_DblN_descend_se_Rec_CPFV(3) Size_DblN_ascend_se_Rec_CPFV(3) -0.577371
Size_DblN_descend_se_Rec_Private(4) Size_DblN_peak_Rec_Private(4) -0.556845
Main_RecrDev_1991 Main_RecrDev_1990 -0.535864
Main_RecrDev_1992 Main_RecrDev_1991 -0.517117
Main_RecrDev_2000 Main_RecrDev_1999 -0.505709
Main_RecrDev_1999 Main_RecrDev_1998 -0.491524
Main_RecrDev_1996 Main_RecrDev_1995 -0.466344
CV_old_Mal_GP_1 CV_young_Mal_GP_1 -0.459063
CV_old_Fem_GP_1 CV_young_Fem_GP_1 -0.458711
Size_DblN_descend_se_Rec_Private(4) Size_DblN_ascend_se_Rec_Private(4) -0.455464
Size_DblN_descend_se_CCFRP(5) Size_DblN_ascend_se_CCFRP(5) -0.44971
Main_RecrDev_2010 SR_LN(R0) -0.44363
Main_RecrDev_2009 SR_LN(R0) -0.437587
Main_RecrDev_1995 Main_RecrDev_1994 -0.432684
Main_RecrDev_2013 SR_LN(R0) -0.429652
Main_RecrDev_2001 Main_RecrDev_2000 -0.427401
Main_RecrDev_2005 Main_RecrDev_2004 -0.399322
Main_RecrDev_1998 Main_RecrDev_1997 -0.397385
CV_young_Mal_GP_1 L_at_Amin_Mal_GP_1 -0.378811
Main_RecrDev_2004 Main_RecrDev_2003 -0.368046
Main_RecrDev_1990 Main_RecrDev_1989 -0.348701
Main_RecrDev_1997 Main_RecrDev_1996 -0.342626
Main_RecrDev_1978 Main_RecrDev_1977 -0.341468
Main_RecrDev_1973 Main_RecrDev_1972 -0.339024
Main_RecrDev_1993 Main_RecrDev_1992 -0.335874
Main_RecrDev_1986 Main_RecrDev_1985 -0.325331
L_at_Amax_Fem_GP_1 L_at_Amin_Fem_GP_1 0.322364
Main_RecrDev_2012 SR_LN(R0) -0.322134
Main_RecrDev_1974 Main_RecrDev_1973 -0.312814

Parameters with low correlations
Estimated parameters that are the least correlated with all other parameters. The correlation value represents the maximum correlation between the parameter in question and all other estimated parameters. Uncorrelated parameters may not be playing a significant role in the model. Maximum correlations below 0.01 are colored in red.
file: lowcorrelationcheck.html

Parameter max_correlation
Early_InitAge_36 9.13629e-05
Early_InitAge_35 0.000101775
Early_InitAge_34 0.000113371
Early_InitAge_33 0.000126286
Early_InitAge_32 0.000140668
Early_InitAge_31 0.000156683
Early_InitAge_30 0.000174515
Early_InitAge_29 0.000194368
Early_InitAge_28 0.000216466
Early_InitAge_27 0.000241059
Early_InitAge_26 0.000268424
Early_InitAge_25 0.000298864
Early_InitAge_24 0.000332714
Early_InitAge_23 0.000370341
Early_InitAge_22 0.000412149
Early_InitAge_21 0.00045857
Early_InitAge_20 0.000510084
Early_InitAge_19 0.000567201
Early_InitAge_18 0.000630471
Early_InitAge_17 0.00070047
Early_InitAge_16 0.000777803
Early_InitAge_15 0.000863089
Early_InitAge_14 0.000956944
Early_InitAge_13 0.00105997
Early_InitAge_12 0.00117271
Early_InitAge_11 0.00129561
Early_InitAge_10 0.00142899
Early_InitAge_9 0.00157294
Early_InitAge_8 0.00172735
Early_InitAge_7 0.00189202
Early_InitAge_6 0.00206703
Early_InitAge_5 0.00225346
Early_InitAge_4 0.00245374
Early_InitAge_3 0.00267088
Early_InitAge_2 0.00290716
Early_InitAge_1 0.00316435
Early_RecrDev_1916 0.00344484
Early_RecrDev_1917 0.00374965
Early_RecrDev_1918 0.00408147
Early_RecrDev_1919 0.00444271
Early_RecrDev_1920 0.00483603
Early_RecrDev_1921 0.00526423
Early_RecrDev_1922 0.00573044
Early_RecrDev_1923 0.00623799
Early_RecrDev_1924 0.00679047
Early_RecrDev_1925 0.00739191
Early_RecrDev_1926 0.0080467
Early_RecrDev_1927 0.00875963
Early_RecrDev_1928 0.00953613
Early_RecrDev_1929 0.0103817